NCI National Facility - Software at a site
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Software at the National Facility or Regional HPC facilities site:
Requests for Software
If you require software that is not currently installed, you can request the National Facility to consider acquiring the software or making it available on the system. Please fill in the software request form. If you require a software package from the list below to ported from one of the systems please email help@nf.nci.org.au.

Software List
Some commercially purchased software is controlled by license keys which limit the number of concurrent users. Our scheduling system recognises a "software" resource flag to prevent jobs starting when the appropriate number of license keys is not available. It is important that all users use the software flag for the package. These flags are provided as part of the documented example in each of the links below.

More information on accounts for the National Facility can be found on the NCI National Facility home page.

Environment Modules
Environment Modules provide a great way to easily customize your shell environment to the requirements of whatever software you wish to use. The module command syntax is the same no matter which command shell you are using. They are available on the vu,xe, and dcc.

The alert indicates software that requires some discussion with the facility staff before using. You should read the "How To Use" section of the software for the host for more details.
The hostname suffix tag "-" (eg ac-) means that the software installation is in progress.

Click here to see the list of recently installed software

Computational ChemistryBioinformaticsMath LibrariesStatistics & Mathematics Environments
ABINITvuxeABySSvuxeARPACK and PARPACKvuMaplealertvuxedcc
ACESvuxeBEASTxeBLACSvuxeMathematicaalertvuxedcc
ADFalertvuxeBIOPERLvuxeBLASvuxedccMatlabalertvuxedcc
AmberalertvuxeBioscopedccBoostvuxedccOctavevuxedcc
Amber-GPUalertxeBLASTvuxedccCPLEXvuxePETScvuxedcc
CFOURvuxeBLATvuFFTWvuxedccRvuxedcc
CP2KvuxeCufflinksvuxeGSLvuxedccStataalertvu
CPMDalertvuxeHMMERvuLAPACKvuxedcc
DALTONvuxeHMMER-GPUxeLIBGOTOalertvuxedcc
DFTB-PLUSalertvuxeMAQvuxeMKLvuxedcc
DL_POLYalertvuxempiBLASTvuxeNAGalertvuxedcc
DMol3alertvuxeMrBayesvuxeScalapackvuxedcc
ElkvuPhyMLxeTaoxe
ESPResSoxeSAMtoolsvuxe
GAMESSPLUSvuxeTophat/Bowtievuxe
Gamess-USvuxeVelvetvuxedcc
Gaussianalertvuxewgs-CABOGvuxe
GaussViewalertvuxe
GROMACSvuxe
GULPalertvuxe
LAMMPSvuxe
LAMMPS-GPUxe
LIGGGHTSvuxe
LIGGGHTS-GPUxe
Moldenvuxe
Molprovuxe
MRCCvuxe
NAMDalertvuxe
NAMD-GPUalertxe
NWChemvuxe
Open Babelvuxe
OpenMM-GPUxe
ORCAalertvuxe
PSIvu
Q-Chemvuxe
Quantum ESPRESSOvuxe
QUDAxe
SIESTAalertvuxe
TURBOMOLEalertvuxe
VASPalertvuxe
VMDalertvuxe
WIEN2kvuxe
CFD & EngineeringClimate Modelling & Earth SystemsGeophysicsGeospatial tools
ABAQUSalertvuxeCCSM3vuCitcomSvuxeGDALvuxedcc
AnsysalertvuCCSM4vuescriptvuPROJ.4vudcc
CFXalertvuCDATvuxedccGalevu
COMSOLalertvuxeCDOvuxedccUnderworldvuxe
FluentalertvuxeCMOR2vuxedcc
LS-Dynaalertvuxeferretvuxedcc
OpenFOAMvuGrADSvuxedcc
NCARGvuxedcc
nccmpvuxedcc
NCLvuxedcc
Unified Modelalertvuxe
wrfvu
Astronomy & AstrophysicsPhotonicsParallel Programming Libraries/ToolsCompilers
cfitsioxeFDTDalertvuxeCudaxeC and C++vuxedcc
DS9xeFullWAVEvuMPIvuxedccFortranvuxedcc
IRAFxemeepvu
MPBvu
Debuggers & Profilers & SimulatorsCode Development UtilitiesScripting LanguagesEditors
HPCToolkitvuxedccmercurialvuxedccjavavuxedcc
Intel Trace AnalyzervuSConsvuxedccPerlvudcc
Intel Trace CollectorvusubversiondccPythonvuxedcc
IPMvuxedccTcl/Tkxedcc
mpiPvuxedcc
Totalviewvuxedcc
valgrindvuxedcc
Vampirvu
VampirTracevu
winealertvuxe
File Formats & Data management packagesData MiningGraphicsNetwork Access and Grid Services
HDF4vuxedccCGALvuxedccbbcpvuxedcc
HDF5vuxedccferretvuxedccftpdcc
IRAFxeFFMPEGvuxesshvuxedcc
lzmaxeFreesurfervuxeVNCvuxe
nccmpvuxedccFSLvuxe
NCOvuxedccGNUplotdcc
netCDFvuxedccGracevuxe
unrarvuIDLalertvuxedcc
xzvuxelibFAMEvuxe
MESAdcc
NCARGvuxedcc
NCLvuxedcc
Ncviewvuxedcc
PGplotvuxe
POVRayvuxe
VisItvu
VMDalertvuxe
 
Partner contact email: help@nf.nci.org.auEmail problems, suggestions, questions to help@nf.nci.org.au